Models & Code

The OpenFold software ecosystem

OpenFold develops state-of-the-art, permissively licensed AI tools for protein and biomolecular structure prediction. The entire training and inference stack, along with training datasets, is released under the Apache 2.0 license, making atomic-accuracy modeling accessible in open source for both research and commercial use.

Apache 2.0

OpenFold

Our core model, inspired by AlphaFold2, with full training and inference code for high-accuracy protein folding.

Apache 2.0

OpenFold3

An open-source cofolding system predicting 3D structures of biomolecular complexes from sequence and molecular inputs.

Apache 2.0

OpenFold-Multimer

Inspired by AlphaFold-Multimer, for modeling protein–protein interactions and multimeric complexes.

Apache 2.0

OpenFold-SoloSeq

Predicts protein structures equivalent to OpenFold with no Multiple Sequence Alignment input required.

Ecosystem

Built on OpenFold

Tools and research from across the community built using OpenFold.

AQAffinity

SandboxAQ, high-speed, structure-free protein–ligand binding affinity prediction built on OpenFold3.

ApherisFold

Apheris, federated protein structure prediction powered by OpenFold.

ESMFold

Meta, language-model-based protein structure prediction.

MLPerf

OpenFold serves as a benchmark in the MLPerf HPC training suite.

AlphaLink

Integrating crosslinking mass-spectrometry data into structure prediction.

AlphaFlow

Generating protein conformational ensembles with flow matching.

DEERFold

Steering structure prediction with distance-distribution restraints.